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Resource ValueSet/FHIR Server from package us.nlm.vsac#0.22.0 (94 ms)

Package us.nlm.vsac
Type ValueSet
Id Id
FHIR Version R4
Source http://fhir.org/packages/us.nlm.vsac/https://vsac.nlm.nih.gov/valueset/2.16.840.1.113762.1.4.1146.994/expansion
Url http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.994
Version 20230125
Status active
Date 2023-01-25T01:08:07-05:00
Name OrganismsTestsForNucleicAcid
Title Organisms (Tests for Nucleic Acid)
Experimental False
Realm us
Authority hl7
Purpose (Clinical Focus: This set of values contains codes for laboratory test names associated with detecting the Nucleic Acid of non-specific organisms.),(Data Element Scope: Laboratory tests names that were ordered or observed.),(Inclusion Criteria: LOINC search: "(microorganism or pathogens) nucleic acid -panel" plus "41852-5 Microorganism or agent identified in Unspecified specimen"),(Exclusion Criteria: panel test)

Resources that use this resource

No resources found


Resources that this resource uses

CodeSystem
http://loinc.org LOINC Code System
http://loinc.org LOINC codes used in this IG
http://loinc.org Logical Observation Identifiers, Names and Codes (LOINC)


Source

{
  "resourceType" : "ValueSet",
  "id" : "2.16.840.1.113762.1.4.1146.994",
  "meta" : {
    "versionId" : "32",
    "lastUpdated" : "2023-12-21T17:43:03.000-05:00",
    "profile" : [
      "http://hl7.org/fhir/StructureDefinition/shareablevalueset",
      "http://hl7.org/fhir/us/cqfmeasures/StructureDefinition/computable-valueset-cqfm",
      "http://hl7.org/fhir/us/cqfmeasures/StructureDefinition/publishable-valueset-cqfm"
    ]
  },
  "extension" : [
    {
      "url" : "http://hl7.org/fhir/StructureDefinition/valueset-author",
      "valueContactDetail" : {
        "name" : "CSTE Author"
      }
    },
    {
      "url" : "http://hl7.org/fhir/StructureDefinition/valueset-keyWord",
      "valueString" : "G_Common"
    },
    {
      "url" : "http://hl7.org/fhir/StructureDefinition/resource-lastReviewDate",
      "valueDate" : "2024-06-05"
    },
    {
      "url" : "http://hl7.org/fhir/StructureDefinition/valueset-effectiveDate",
      "valueDate" : "2023-01-25"
    }
  ],
  "url" : "http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.994",
  "identifier" : [
    {
      "system" : "urn:ietf:rfc:3986",
      "value" : "urn:oid:2.16.840.1.113762.1.4.1146.994"
    }
  ],
  "version" : "20230125",
  "name" : "OrganismsTestsForNucleicAcid",
  "title" : "Organisms (Tests for Nucleic Acid)",
  "status" : "active",
  "date" : "2023-01-25T01:08:07-05:00",
  "publisher" : "CSTE Steward",
  "jurisdiction" : [
    {
      "coding" : [
        {
          "system" : "urn:iso:std:iso:3166",
          "code" : "US"
        }
      ]
    }
  ],
  "purpose" : "(Clinical Focus: This set of values contains codes for laboratory test names associated with detecting the Nucleic Acid of non-specific organisms.),(Data Element Scope: Laboratory tests names that were ordered or observed.),(Inclusion Criteria: LOINC search: \"(microorganism or pathogens) nucleic acid -panel\" plus \"41852-5 Microorganism or agent identified in Unspecified specimen\"),(Exclusion Criteria: panel test)",
  "compose" : {
    "include" : [
      {
        "system" : "http://loinc.org",
        "concept" : [
          {
            "code" : "35691-5",
            "display" : "XXX microorganism DNA [Presence] in Specimen by NAA with probe detection"
          },
          {
            "code" : "38347-1",
            "display" : "XXX microorganism DNA [Identifier] in Specimen by NAA with probe detection"
          },
          {
            "code" : "40971-4",
            "display" : "XXX microorganism DNA [Presence] in Urine by NAA with probe detection"
          },
          {
            "code" : "40972-2",
            "display" : "XXX microorganism DNA [Presence] in Serum or Plasma by NAA with probe detection"
          },
          {
            "code" : "62201-9",
            "display" : "XXX microorganism DNA [Identifier] in Serum or Plasma by NAA with probe detection"
          },
          {
            "code" : "66885-5",
            "display" : "Bacteria identified based on 16S rRNA gene [Identifier] in Specimen by Sequencing"
          },
          {
            "code" : "79390-1",
            "display" : "Gastrointestinal pathogens identified in Stool by NAA with probe detection"
          },
          {
            "code" : "80602-6",
            "display" : "Respiratory pathogens identified [Type] in Nasopharynx by NAA with probe detection"
          },
          {
            "code" : "81655-3",
            "display" : "Respiratory pathogens DNA and RNA identified in Respiratory specimen by NAA with probe detection"
          },
          {
            "code" : "82125-6",
            "display" : "Respiratory pathogens DNA and RNA tested for in Pleural fluid by NAA with probe detection"
          },
          {
            "code" : "82127-2",
            "display" : "Respiratory pathogens DNA and RNA identified in Pleural fluid by NAA with probe detection"
          },
          {
            "code" : "82134-8",
            "display" : "Respiratory pathogens DNA and RNA tested for in Respiratory specimen by NAA with probe detection"
          },
          {
            "code" : "88516-0",
            "display" : "Gastrointestinal pathogens identified in Specimen by NAA with probe detection"
          },
          {
            "code" : "92249-2",
            "display" : "Microorganism gene tested for [Identifier] by Molecular method"
          },
          {
            "code" : "92251-8",
            "display" : "Microorganism gene detected [Presence] by Molecular method"
          },
          {
            "code" : "92253-4",
            "display" : "Microorganism identified in Isolate or Specimen by Molecular genetics method"
          }
        ]
      }
    ]
  },
  "expansion" : {
    "identifier" : "urn:uuid:72d29155-80d5-4f11-9cd1-c4409d545d0e",
    "timestamp" : "2025-05-11T04:36:05-04:00",
    "total" : 16,
    "contains" : [
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "35691-5",
        "display" : "XXX microorganism DNA [Presence] in Specimen by NAA with probe detection"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "38347-1",
        "display" : "XXX microorganism DNA [Identifier] in Specimen by NAA with probe detection"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "40971-4",
        "display" : "XXX microorganism DNA [Presence] in Urine by NAA with probe detection"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "40972-2",
        "display" : "XXX microorganism DNA [Presence] in Serum or Plasma by NAA with probe detection"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "62201-9",
        "display" : "XXX microorganism DNA [Identifier] in Serum or Plasma by NAA with probe detection"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "66885-5",
        "display" : "Bacteria identified based on 16S rRNA gene [Identifier] in Specimen by Sequencing"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "79390-1",
        "display" : "Gastrointestinal pathogens identified in Stool by NAA with probe detection"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "80602-6",
        "display" : "Respiratory pathogens identified [Type] in Nasopharynx by NAA with probe detection"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "81655-3",
        "display" : "Respiratory pathogens DNA and RNA [Identifier] in Respiratory system specimen by NAA with probe detection"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "82125-6",
        "display" : "Respiratory pathogens DNA and RNA tested for in Pleural fluid by NAA with probe detection"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "82127-2",
        "display" : "Respiratory pathogens DNA and RNA [Identifier] in Pleural fluid by NAA with probe detection"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "82134-8",
        "display" : "Respiratory pathogens DNA and RNA tested for in Respiratory system specimen by NAA with probe detection"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "88516-0",
        "display" : "Gastrointestinal pathogens identified in Specimen by NAA with probe detection"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "92249-2",
        "display" : "Microorganism gene tested for [Identifier] by Molecular method"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "92251-8",
        "display" : "Microorganism gene detected [Presence] by Molecular method"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "92253-4",
        "display" : "Microorganism identified in Isolate or Specimen by Molecular genetics method"
      }
    ]
  },
  "text" : {
  }
}

XIG built as of ??metadata-date??. Found ??metadata-resources?? resources in ??metadata-packages?? packages.